The ideal drivehight for a SSM ,or better a surface drive prop is flush with the bottom of the boat ( propshaft ).
Therefor with the 3a's u never get there ,so i would say NO boxes.
since u have a notched transom ,,,that is already your box !!!!!!
U also dont want to change your engine hight because of the balance of the boat,,,so u will be around 1 inch higher then u are now with the TRS ,,it will help,,but i would go look for a set of #4's or 5's with a 1 inch spacer they be just fine ,,or then wih boxes and no spacer !!!!!!!
The props u should get are 17 X 27 to start,,maybe 28's with 750 each side.
side by side engine likes diameter,,so don't go below 17 inch !!!!!
BEEN THERE ,DONE THIS, ok ok ..still do this .LOL
PS.: need anything or help,,,let me know.
Scott